LabLynx Wiki
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
LIMSpec Wiki
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
Bioinformatics Wiki
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
IHE Wiki
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
HL7 Wiki
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
Clinfowiki
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
OpenWetWare
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
Statistical Genetics Wiki
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
Cloud-Standards.org
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
WikiBooks
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
LIMSwiki
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
Wikiversity
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
Wikipedia
Genomes on the Cloud (GotCloud) Introduction
To handle the increasing volume of next generation sequencing and genotyping data, we created and developed software pipelines called Genomes on the Cloud (GotCloud).
GotCloud contains Mapping & Variant Calling Pipelines.
Key Features:
- Connects sequence analysis tools together in automated pipeline
- Alignment, quality control, variant calling
- Robust against unexpected system failure using GNU make
- easy restart after failure
- Massively parallel, can run hundreds of jobs
- Splits large jobs into many pieces
- Simplifies running on clusters
- Scalable to tens of thousands of samples
- Easy to use - Automates series of configurable steps
- user doesn't have to understand/configure/know the many tools required to create high quality results
- Available on Amazon Web Services (AWS) Elastic Compute Cloud (EC2)
- Run on local machines/clusters
GotCloud incorporates the alignment and variant calling pipelines that we have been using at UM into one easy to use, publicly available tool.
